CRISPRone

CRISPRone report for GCA_016093765.1_ASM1609376v1

♦ Seq 1: VBZN01000048.1 Clostridioides difficile strain GV962 1976_S69_L001_R1_001__paired__contig_48, whole genome shotgun sequence

⇒Summary: seq-len = 3413 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1210-1504 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VBZN01000001.1 Clostridioides difficile strain GV962 1976_S69_L001_R1_001__paired__contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 145106 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 95302-95860 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VBZN01000077.1 Clostridioides difficile strain GV962 1976_S69_L001_R1_001__paired__contig_77, whole genome shotgun sequence

⇒Summary: seq-len = 45937 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9485-10575 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VBZN01000139.1 Clostridioides difficile strain GV962 1976_S69_L001_R1_001__paired__contig_142, whole genome shotgun sequence

⇒Summary: seq-len = 14368 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13420-14370 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VBZN01000084.1 Clostridioides difficile strain GV962 1976_S69_L001_R1_001__paired__contig_84, whole genome shotgun sequence

⇒Summary: seq-len = 10283 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9345-10297 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VBZN01000108.1 Clostridioides difficile strain GV962 1976_S69_L001_R1_001__paired__contig_110, whole genome shotgun sequence

⇒Summary: seq-len = 6724 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2682-3040 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VBZN01000011.1 Clostridioides difficile strain GV962 1976_S69_L001_R1_001__paired__contig_11, whole genome shotgun sequence

⇒Summary: seq-len = 60714 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-1076 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VBZN01000032.1 Clostridioides difficile strain GV962 1976_S69_L001_R1_001__paired__contig_32, whole genome shotgun sequence

⇒Summary: seq-len = 36930 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6792-6951 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: VBZN01000200.1 Clostridioides difficile strain GV962 1976_S69_L001_R1_001__paired__contig_207, whole genome shotgun sequence

⇒Summary: seq-len = 6087 bp; # of CRISPR array = 0; # of cas gene = 7  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: VBZN01000095.1 Clostridioides difficile strain GV962 1976_S69_L001_R1_001__paired__contig_96, whole genome shotgun sequence

⇒Summary: seq-len = 29211 bp; # of CRISPR array = 0; # of cas gene = 5  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: VBZN01000061.1 Clostridioides difficile strain GV962 1976_S69_L001_R1_001__paired__contig_61, whole genome shotgun sequence

⇒Summary: seq-len = 13072 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: VBZN01000074.1 Clostridioides difficile strain GV962 1976_S69_L001_R1_001__paired__contig_74, whole genome shotgun sequence

⇒Summary: seq-len = 31256 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-94 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: VBZN01000119.1 Clostridioides difficile strain GV962 1976_S69_L001_R1_001__paired__contig_122, whole genome shotgun sequence

⇒Summary: seq-len = 10919 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2998-4013 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)