CRISPRone

CRISPRone report for GCA_016093815.1_ASM1609381v1

♦ Seq 1: VCDT01000061.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_61, whole genome shotgun sequence

⇒Summary: seq-len = 596 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-611 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VCDT01000011.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_11, whole genome shotgun sequence

⇒Summary: seq-len = 33215 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 29187-29347 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VCDT01000107.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_109, whole genome shotgun sequence

⇒Summary: seq-len = 662 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-673 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VCDT01000036.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_36, whole genome shotgun sequence

⇒Summary: seq-len = 91912 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 91695-91924 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VCDT01000086.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_87, whole genome shotgun sequence

⇒Summary: seq-len = 3352 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-288 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VCDT01000046.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_46, whole genome shotgun sequence

⇒Summary: seq-len = 45578 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-607 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VCDT01000089.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_90, whole genome shotgun sequence

⇒Summary: seq-len = 6977 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6620-6979 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VCDT01000022.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_22, whole genome shotgun sequence

⇒Summary: seq-len = 38435 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38276-38437 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: VCDT01000083.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_84, whole genome shotgun sequence

⇒Summary: seq-len = 202 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-216 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: VCDT01000017.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_17, whole genome shotgun sequence

⇒Summary: seq-len = 93461 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-687 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: VCDT01000025.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_25, whole genome shotgun sequence

⇒Summary: seq-len = 144895 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24859-25018 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: VCDT01000018.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_18, whole genome shotgun sequence

⇒Summary: seq-len = 79779 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 79308-79794 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: VCDT01000007.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_7, whole genome shotgun sequence

⇒Summary: seq-len = 171189 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: VCDT01000082.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_83, whole genome shotgun sequence

⇒Summary: seq-len = 799 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-816 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 15: VCDT01000013.1 Clostridioides difficile strain GV870 1809_S65_L001_R1_001__paired__contig_13, whole genome shotgun sequence

⇒Summary: seq-len = 218920 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 218827-218922 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)