CRISPRone

CRISPRone report for GCA_016093875.1_ASM1609387v1

♦ Seq 1: VBZR01000017.1 Clostridioides difficile strain GV814 1561_S54_L001_R1_001__paired__contig_17, whole genome shotgun sequence

⇒Summary: seq-len = 135912 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 135224-135911 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VBZR01000028.1 Clostridioides difficile strain GV814 1561_S54_L001_R1_001__paired__contig_28, whole genome shotgun sequence

⇒Summary: seq-len = 206024 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 79303-79662 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VBZR01000038.1 Clostridioides difficile strain GV814 1561_S54_L001_R1_001__paired__contig_38, whole genome shotgun sequence

⇒Summary: seq-len = 103103 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21081-21375 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VBZR01000051.1 Clostridioides difficile strain GV814 1561_S54_L001_R1_001__paired__contig_51, whole genome shotgun sequence

⇒Summary: seq-len = 38825 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38276-38834 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VBZR01000001.1 Clostridioides difficile strain GV814 1561_S54_L001_R1_001__paired__contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 56881 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 56467-56893 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VBZR01000063.1 Clostridioides difficile strain GV814 1561_S54_L001_R1_001__paired__contig_63, whole genome shotgun sequence

⇒Summary: seq-len = 16408 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16186-16409 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VBZR01000075.1 Clostridioides difficile strain GV814 1561_S54_L001_R1_001__paired__contig_75, whole genome shotgun sequence

⇒Summary: seq-len = 202 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-214 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VBZR01000040.1 Clostridioides difficile strain GV814 1561_S54_L001_R1_001__paired__contig_40, whole genome shotgun sequence

⇒Summary: seq-len = 53836 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 50862-51022 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: VBZR01000019.1 Clostridioides difficile strain GV814 1561_S54_L001_R1_001__paired__contig_19, whole genome shotgun sequence

⇒Summary: seq-len = 290221 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 610-2082 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: VBZR01000026.1 Clostridioides difficile strain GV814 1561_S54_L001_R1_001__paired__contig_26, whole genome shotgun sequence

⇒Summary: seq-len = 38590 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-293 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: VBZR01000068.1 Clostridioides difficile strain GV814 1561_S54_L001_R1_001__paired__contig_68, whole genome shotgun sequence

⇒Summary: seq-len = 599 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-611 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: VBZR01000045.1 Clostridioides difficile strain GV814 1561_S54_L001_R1_001__paired__contig_45, whole genome shotgun sequence

⇒Summary: seq-len = 98691 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: VBZR01000070.1 Clostridioides difficile strain GV814 1561_S54_L001_R1_001__paired__contig_70, whole genome shotgun sequence

⇒Summary: seq-len = 411 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-424 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)