CRISPRone

CRISPRone report for GCA_016093965.1_ASM1609396v1

♦ Seq 1: VBZV01000002.1 Clostridioides difficile strain GV589 845_S13_L001_R1_001__paired__contig_2, whole genome shotgun sequence

⇒Summary: seq-len = 113849 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 24455-26191 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VBZV01000036.1 Clostridioides difficile strain GV589 845_S13_L001_R1_001__paired__contig_36, whole genome shotgun sequence

⇒Summary: seq-len = 45894 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38277-39493 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VBZV01000013.1 Clostridioides difficile strain GV589 845_S13_L001_R1_001__paired__contig_13, whole genome shotgun sequence

⇒Summary: seq-len = 497326 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 92056-92350 bp]: array | spacers
           [Locus range 300455-300813 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VBZV01000024.1 Clostridioides difficile strain GV589 845_S13_L001_R1_001__paired__contig_24, whole genome shotgun sequence

⇒Summary: seq-len = 132206 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18278-19169 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VBZV01000030.1 Clostridioides difficile strain GV589 845_S13_L001_R1_001__paired__contig_30, whole genome shotgun sequence

⇒Summary: seq-len = 361782 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2817-2976 bp]: array | spacers
           [Locus range 84581-85595 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VBZV01000029.1 Clostridioides difficile strain GV589 845_S13_L001_R1_001__paired__contig_29, whole genome shotgun sequence

⇒Summary: seq-len = 116067 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 110204-111219 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VBZV01000001.1 Clostridioides difficile strain GV589 845_S13_L001_R1_001__paired__contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 326320 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 192885-193443 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)