CRISPRone

CRISPRone report for GCA_016094085.1_ASM1609408v1

♦ Seq 1: VCAD01000019.1 Clostridioides difficile strain GV457 229_S2_L001_R1_001__paired__contig_19, whole genome shotgun sequence

⇒Summary: seq-len = 131956 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18281-19304 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VCAD01000006.1 Clostridioides difficile strain GV457 229_S2_L001_R1_001__paired__contig_6, whole genome shotgun sequence

⇒Summary: seq-len = 123707 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44719-45996 bp]: array | spacers
           [Locus range 97084-97244 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VCAD01000010.1 Clostridioides difficile strain GV457 229_S2_L001_R1_001__paired__contig_10, whole genome shotgun sequence

⇒Summary: seq-len = 281990 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 192401-194137 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VCAD01000004.1 Clostridioides difficile strain GV457 229_S2_L001_R1_001__paired__contig_4, whole genome shotgun sequence

⇒Summary: seq-len = 337776 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 298284-299499 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VCAD01000001.1 Clostridioides difficile strain GV457 229_S2_L001_R1_001__paired__contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 793544 bp; # of CRISPR array = 2; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 244763-245321 bp]: array | spacers
           [Locus range 488406-489421 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VCAD01000007.1 Clostridioides difficile strain GV457 229_S2_L001_R1_001__paired__contig_7, whole genome shotgun sequence

⇒Summary: seq-len = 491226 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 190404-190763 bp]: array | spacers
           [Locus range 398877-399172 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)