CRISPRone

CRISPRone report for GCA_016094135.1_ASM1609413v1

♦ Seq 1: VCAE01000032.1 Clostridioides difficile strain GV432 206_GGCTAC_L002_R1_001_GGCTAC__paired__contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 306727 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 302778-303727 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VCAE01000027.1 Clostridioides difficile strain GV432 206_GGCTAC_L002_R1_001_GGCTAC__paired__contig_5, whole genome shotgun sequence

⇒Summary: seq-len = 485339 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 185830-186189 bp]: array | spacers
           [Locus range 394303-394598 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VCAE01000033.1 Clostridioides difficile strain GV432 206_GGCTAC_L002_R1_001_GGCTAC__paired__contig_15, whole genome shotgun sequence

⇒Summary: seq-len = 485028 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 239808-240365 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VCAE01000037.1 Clostridioides difficile strain GV432 206_GGCTAC_L002_R1_001_GGCTAC__paired__contig_3, whole genome shotgun sequence

⇒Summary: seq-len = 339521 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 77399-79134 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VCAE01000029.1 Clostridioides difficile strain GV432 206_GGCTAC_L002_R1_001_GGCTAC__paired__contig_4, whole genome shotgun sequence

⇒Summary: seq-len = 454100 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38150-39037 bp]: array | spacers
           [Locus range 356903-357062 bp]: array | spacers
           [Locus range 407975-409381 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VCAE01000028.1 Clostridioides difficile strain GV432 206_GGCTAC_L002_R1_001_GGCTAC__paired__contig_24, whole genome shotgun sequence

⇒Summary: seq-len = 154109 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17647-18737 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)