CRISPRone

CRISPRone report for GCA_016094285.1_ASM1609428v1

♦ Seq 1: VCAN01000027.1 Clostridioides difficile strain GV364 136_GAGTGG_L002_R1_001_GAGTGG__paired__contig_7, whole genome shotgun sequence

⇒Summary: seq-len = 454408 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38150-39366 bp]: array | spacers
           [Locus range 357211-357370 bp]: array | spacers
           [Locus range 408283-409689 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VCAN01000028.1 Clostridioides difficile strain GV364 136_GAGTGG_L002_R1_001_GAGTGG__paired__contig_5, whole genome shotgun sequence

⇒Summary: seq-len = 307868 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 304166-305050 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VCAN01000024.1 Clostridioides difficile strain GV364 136_GAGTGG_L002_R1_001_GAGTGG__paired__contig_20, whole genome shotgun sequence

⇒Summary: seq-len = 28831 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17647-18737 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VCAN01000031.1 Clostridioides difficile strain GV364 136_GAGTGG_L002_R1_001_GAGTGG__paired__contig_2, whole genome shotgun sequence

⇒Summary: seq-len = 296981 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 77400-78152 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VCAN01000022.1 Clostridioides difficile strain GV364 136_GAGTGG_L002_R1_001_GAGTGG__paired__contig_6, whole genome shotgun sequence

⇒Summary: seq-len = 462055 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 189488-189847 bp]: array | spacers
           [Locus range 397961-398256 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VCAN01000029.1 Clostridioides difficile strain GV364 136_GAGTGG_L002_R1_001_GAGTGG__paired__contig_12, whole genome shotgun sequence

⇒Summary: seq-len = 487845 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 239797-240354 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)