CRISPRone

CRISPRone report for GCA_016094335.1_ASM1609433v1

♦ Seq 1: VCAM01000021.1 Clostridioides difficile strain GV371 143_CGTACG_L002_R1_001_CGTACG__paired__contig_16, whole genome shotgun sequence

⇒Summary: seq-len = 154880 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18350-19440 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VCAM01000022.1 Clostridioides difficile strain GV371 143_CGTACG_L002_R1_001_CGTACG__paired__contig_9, whole genome shotgun sequence

⇒Summary: seq-len = 454488 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38150-39366 bp]: array | spacers
           [Locus range 357291-357450 bp]: array | spacers
           [Locus range 408363-409769 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VCAM01000029.1 Clostridioides difficile strain GV371 143_CGTACG_L002_R1_001_CGTACG__paired__contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 300295 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 77400-78872 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VCAM01000020.1 Clostridioides difficile strain GV371 143_CGTACG_L002_R1_001_CGTACG__paired__contig_10, whole genome shotgun sequence

⇒Summary: seq-len = 489367 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 189779-190138 bp]: array | spacers
           [Locus range 398252-398547 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VCAM01000026.1 Clostridioides difficile strain GV371 143_CGTACG_L002_R1_001_CGTACG__paired__contig_8, whole genome shotgun sequence

⇒Summary: seq-len = 484999 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 239891-240382 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VCAM01000025.1 Clostridioides difficile strain GV371 143_CGTACG_L002_R1_001_CGTACG__paired__contig_7, whole genome shotgun sequence

⇒Summary: seq-len = 306644 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 302812-303826 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)