CRISPRone

CRISPRone report for GCA_016105505.1_ASM1610550v1

♦ Seq 1: CP065865.1 Pseudomonas aeruginosa strain TJ2019-022 chromosome, complete genome

⇒Summary: seq-len = 7157191 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2509558-2530607 bp 2 Locus 2: 3333323-3344003 bp Zoom in on locus 1 Zoom in on locus 2 x10 x26 Gene: mkCas0090:PD-DExK Type: other Location: 2509558-2510283 bp Gene: pfam00078:RT Type: other Location: 2519950-2521056 bp Gene: pfam00078:RT Type: other Location: 2529321-2530607 bp CRISPR array Location: 3333323-3333891 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 3333323-3333891 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09739:cas6f Type: other Location: 3334075-3334638 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3334642-3335670 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 3335681-3336664 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3336651-3337955 bp Gene: COG1203:cas3 Type: Type-I Location: 3338013-3341243 bp Gene: cd09718:cas1 Type: universal Location: 3341240-3342214 bp CRISPR array Location: 3342476-3344003 bp Num of repeats: 26 Spacers: s10-s34 CRISPR array Location: 3342476-3344003 bp Num of repeats: 26 Spacers: s10-s34 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 3333323-3333891 bp]: array | spacers
           [Locus range 3342476-3344003 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)