CRISPRone

CRISPRone report for GCA_016105665.1_ASM1610566v1

♦ Seq 1: CP065866.1 Pseudomonas aeruginosa strain TJ2019-017 chromosome, complete genome

⇒Summary: seq-len = 6478778 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1503228-1504336 bp 2 Locus 2: 2870491-2880750 bp Zoom in on locus 1 x19 Zoom in on locus 2 x16 x13 CRISPR array Location: 1503228-1504336 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 1503228-1504336 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 2870491-2871420 bp Num of repeats: 16 Spacers: s19-s33 CRISPR array Location: 2870491-2871420 bp Num of repeats: 16 Spacers: s19-s33 Gene: cd09739:cas6f Type: other Location: 2871603-2872166 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2872170-2873198 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2873209-2874192 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2874179-2875483 bp Gene: COG1203:cas3 Type: Type-I Location: 2875541-2878771 bp Gene: cd09718:cas1 Type: universal Location: 2878768-2879742 bp CRISPR array Location: 2880003-2880750 bp Num of repeats: 13 Spacers: s34-s45 CRISPR array Location: 2880003-2880750 bp Num of repeats: 13 Spacers: s34-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1503228-1504336 bp]: array | spacers
           [Locus range 2870491-2871420 bp]: array | spacers
           [Locus range 2880003-2880750 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)