CRISPRone

CRISPRone report for GCA_016623685.1_ASM1662368v1

♦ Seq 1: JAEKFZ010000001.1 Bacteroides fragilis strain FDAARGOS_1025 ctg.s1.000000F_arrow_pilon, whole genome shotgun sequence

⇒Summary: seq-len = 5113356 bp; # of CRISPR array = 2; # of cas gene = 9  (type I, II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2540590-2549350 bp 2 Locus 2: 3220772-3224385 bp 3 Locus 3: 4210195-4212512 bp Zoom in on locus 1 x27 Zoom in on locus 2 Zoom in on locus 3 x9 Gene: cd09643:cas9 Type: Subtype-II-C Location: 2540590-2544900 bp Gene: unk Type: unknown Location: 2544916-2545440 bp Gene: unk Type: unknown Location: 2545507-2545815 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 2545935-2546867 bp Gene: pfam09827:cas2 Type: Subtype-II-C Location: 2546871-2547203 bp CRISPR array Location: 2547312-2549350 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 2547312-2549350 bp Num of repeats: 27 Spacers: s1-s26 Gene: pfam13280:WYL Type: other Location: 3220772-3221671 bp Gene: unk Type: unknown Location: 3221668-3222933 bp Gene: unk Type: unknown Location: 3222941-3223714 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 3223717-3224385 bp Gene: cd09652:cas6 Type: other Location: 4210195-4210866 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 4210878-4211258 bp Gene: cd09722:cas1 Type: universal Location: 4211251-4211490 bp Gene: cd09725:cas2 Type: universal Location: 4211493-4211756 bp CRISPR array Location: 4211969-4212512 bp Num of repeats: 9 Spacers: s27-s34 CRISPR array Location: 4211969-4212512 bp Num of repeats: 9 Spacers: s27-s34 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2547312-2549350 bp]: array | spacers
           [Locus range 4211969-4212512 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)