CRISPRone

CRISPRone report for GCA_900074795.1_CD105KSO7

♦ Seq 1: FJUH01000046.1 Peptoclostridium difficile strain CD105KSO7 genome assembly, contig: {contig46}, whole genome shotgun sequence

⇒Summary: seq-len = 24617 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1590-3643 bp Zoom in on locus 1 Gene: cd09718:cas1 Type: universal Location: 1590-3245 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 3257-3643 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FJUH01000025.1 Peptoclostridium difficile strain CD105KSO7 genome assembly, contig: {contig25}, whole genome shotgun sequence

⇒Summary: seq-len = 54137 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 42743-43297 bp Zoom in on locus 1 x9 CRISPR array Location: 42743-43297 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 42743-43297 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 42743-43297 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FJUH01000010.1 Peptoclostridium difficile strain CD105KSO7 genome assembly, contig: {contig10}, whole genome shotgun sequence

⇒Summary: seq-len = 83489 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 23568-23665 bp 2 Locus 2: 80822-80919 bp Zoom in on locus 1 x2 Zoom in on locus 2 x2 CRISPR array Location: 23568-23665 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 23568-23665 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 80822-80919 bp Num of repeats: 2 Spacers: s2-s2 CRISPR array Location: 80822-80919 bp Num of repeats: 2 Spacers: s2-s2 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 23568-23665 bp]: array | spacers
           [Locus range 80822-80919 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FJUH01000027.1 Peptoclostridium difficile strain CD105KSO7 genome assembly, contig: {contig27}, whole genome shotgun sequence

⇒Summary: seq-len = 15686 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3390-3944 bp Zoom in on locus 1 x9 CRISPR array Location: 3390-3944 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 3390-3944 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 3390-3944 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FJUH01000584.1 Peptoclostridium difficile strain CD105KSO7 genome assembly, contig: {contig584}, whole genome shotgun sequence

⇒Summary: seq-len = 4628 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2555-4287 bp Zoom in on locus 1 x27 CRISPR array Location: 2555-4287 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 2555-4287 bp Num of repeats: 27 Spacers: s1-s26 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 2555-4287 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FJUH01000609.1 Peptoclostridium difficile strain CD105KSO7 genome assembly, contig: {contig609}, whole genome shotgun sequence

⇒Summary: seq-len = 78720 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 78659-78734 bp Zoom in on locus 1 x2 CRISPR array Location: 78659-78734 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 78659-78734 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 78659-78734 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)