CRISPRone

CRISPRone report for GCA_900096015.1_ASM90009601v1

♦ Seq 1: FMLA01000026.1 Clostridioides difficile isolate CD105HS20 genome assembly, contig: contig000026, whole genome shotgun sequence

⇒Summary: seq-len = 3667 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 0-84 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FMLA01000023.1 Clostridioides difficile isolate CD105HS20 genome assembly, contig: contig000023, whole genome shotgun sequence

⇒Summary: seq-len = 6231 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 1165-1390 bp]: array | spacers
[Locus range 3049-3143 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FMLA01000005.1 Clostridioides difficile isolate CD105HS20 genome assembly, contig: contig000005, whole genome shotgun sequence

⇒Summary: seq-len = 258518 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 18115-19924 bp]: array | spacers
[Locus range 193508-194912 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FMLA01000002.1 Clostridioides difficile isolate CD105HS20 genome assembly, contig: contig000002, whole genome shotgun sequence

⇒Summary: seq-len = 558021 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 189956-190379 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FMLA01000007.1 Clostridioides difficile isolate CD105HS20 genome assembly, contig: contig000007, whole genome shotgun sequence

⇒Summary: seq-len = 211014 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 91728-92618 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FMLA01000003.1 Clostridioides difficile isolate CD105HS20 genome assembly, contig: contig000003, whole genome shotgun sequence

⇒Summary: seq-len = 476371 bp; # of CRISPR array = 1; # of cas gene = 9 (type I)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
[Locus range 275233-275655 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: FMLA01000020.1 Clostridioides difficile isolate CD105HS20 genome assembly, contig: contig000020, whole genome shotgun sequence

⇒Summary: seq-len = 14849 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4639-5727 bp]: array | spacers
           [Locus range 7342-7568 bp]: array | spacers
           [Locus range 7712-7807 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: FMLA01000001.1 Clostridioides difficile isolate CD105HS20 genome assembly, contig: contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 1119306 bp; # of CRISPR array = 3; # of cas gene = 6 (type I, III)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 246557-247053 bp]: array | spacers
           [Locus range 492180-492928 bp]: array | spacers
           [Locus range 865730-866021 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)