CRISPRone

CRISPRone report for GCA_900143765.1_14

♦ Seq 1: FRFV01000082.1 Pseudomonas aeruginosa isolate 14 genome assembly, contig: 14.NODE_102_length_88605_cov_45.576469, whole genome shotgun sequence

⇒Summary: seq-len = 88661 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 15866-24606 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 15866-16735 bp Gene: unk Type: unknown Location: 17076-17288 bp Gene: unk Type: unknown Location: 17394-19532 bp Gene: cls000038:cas7 Type: Subtype-I-B Location: 19532-21313 bp Gene: unk Type: unknown Location: 19772-19969 bp Gene: cd09639:cas3 Type: Type-I Location: 22081-24606 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRFV01000044.1 Pseudomonas aeruginosa isolate 14 genome assembly, contig: 14.NODE_49_length_35844_cov_41.037857, whole genome shotgun sequence

⇒Summary: seq-len = 35900 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 272-10330 bp Zoom in on locus 1 x10 x10 CRISPR array Location: 272-840 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 272-840 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 1091-2065 bp Gene: COG1203:cas3 Type: Type-I Location: 2062-5292 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5703-7004 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6991-7974 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7985-9013 bp Gene: cd09739:cas6f Type: other Location: 9017-9580 bp CRISPR array Location: 9764-10330 bp Num of repeats: 10 Spacers: s10-s18 CRISPR array Location: 9764-10330 bp Num of repeats: 10 Spacers: s10-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 272-840 bp]: array | spacers
           [Locus range 9764-10330 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRFV01000149.1 Pseudomonas aeruginosa isolate 14 genome assembly, contig: 14.NODE_305_length_17965_cov_41.208015, whole genome shotgun sequence

⇒Summary: seq-len = 18021 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 17180-17748 bp Zoom in on locus 1 x10 CRISPR array Location: 17180-17748 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 17180-17748 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 17180-17748 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)