CRISPRone

CRISPRone report for GCA_900143805.1_10

♦ Seq 1: FRFL01000051.1 Pseudomonas aeruginosa isolate 10 genome assembly, contig: 10.NODE_96_length_209500_cov_50.592983, whole genome shotgun sequence

⇒Summary: seq-len = 209548 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 266-835 bp Zoom in on locus 1 x10 CRISPR array Location: 266-835 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 266-835 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 266-835 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRFL01000006.1 Pseudomonas aeruginosa isolate 10 genome assembly, contig: 10.NODE_7_length_156462_cov_57.476154, whole genome shotgun sequence

⇒Summary: seq-len = 156510 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 131913-140653 bp Zoom in on locus 1 Gene: cd09639:cas3 Type: Type-I Location: 131913-134279 bp Gene: cls000038:cas7 Type: Subtype-I-B Location: 135206-136426 bp Gene: unk Type: unknown Location: 136987-139125 bp Gene: unk Type: unknown Location: 139300-139443 bp Gene: pfam13280:WYL Type: other Location: 139784-140653 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRFL01000120.1 Pseudomonas aeruginosa isolate 10 genome assembly, contig: 10.NODE_370_length_48417_cov_48.261955, whole genome shotgun sequence

⇒Summary: seq-len = 48465 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 264-10322 bp Zoom in on locus 1 x10 x10 CRISPR array Location: 264-832 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 264-832 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 1083-2057 bp Gene: COG1203:cas3 Type: Type-I Location: 2054-5284 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5695-6996 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6983-7966 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7977-9005 bp Gene: cd09739:cas6f Type: other Location: 9009-9572 bp CRISPR array Location: 9756-10322 bp Num of repeats: 10 Spacers: s10-s18 CRISPR array Location: 9756-10322 bp Num of repeats: 10 Spacers: s10-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 264-832 bp]: array | spacers
           [Locus range 9756-10322 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)