CRISPRone

CRISPRone report for GCA_900143845.1_62

♦ Seq 1: FRFR01000095.1 Pseudomonas aeruginosa isolate 62 genome assembly, contig: 62.NODE_159_length_166661_cov_55.624447, whole genome shotgun sequence

⇒Summary: seq-len = 166709 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 739-1368 bp Zoom in on locus 1 x11 CRISPR array Location: 739-1368 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 739-1368 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 739-1368 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRFR01000072.1 Pseudomonas aeruginosa isolate 62 genome assembly, contig: 62.NODE_99_length_50309_cov_53.893559, whole genome shotgun sequence

⇒Summary: seq-len = 50357 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38157-50084 bp Zoom in on locus 1 x27 x24 CRISPR array Location: 38157-39742 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 38157-39742 bp Num of repeats: 27 Spacers: s1-s26 Gene: cd09739:cas6f Type: other Location: 39926-40489 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40493-41521 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41532-42515 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42502-43803 bp Gene: COG1203:cas3 Type: Type-I Location: 44214-47444 bp Gene: cd09718:cas1 Type: universal Location: 47441-48415 bp CRISPR array Location: 48676-50084 bp Num of repeats: 24 Spacers: s27-s49 CRISPR array Location: 48676-50084 bp Num of repeats: 24 Spacers: s27-s49 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38157-39742 bp]: array | spacers
           [Locus range 48676-50084 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)