CRISPRone

CRISPRone report for GCA_900143905.1_77

♦ Seq 1: FRFY01000067.1 Pseudomonas aeruginosa isolate 77 genome assembly, contig: 77.NODE_87_length_19271_cov_51.342690, whole genome shotgun sequence

⇒Summary: seq-len = 19327 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 283-2171 bp Zoom in on locus 1 x32 CRISPR array Location: 283-2171 bp Num of repeats: 32 Spacers: s1-s31 CRISPR array Location: 283-2171 bp Num of repeats: 32 Spacers: s1-s31 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 283-2171 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRFY01000088.1 Pseudomonas aeruginosa isolate 77 genome assembly, contig: 77.NODE_130_length_47756_cov_50.681526, whole genome shotgun sequence

⇒Summary: seq-len = 47812 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 765-10613 bp Zoom in on locus 1 x12 x9 CRISPR array Location: 765-1453 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 765-1453 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09718:cas1 Type: universal Location: 1717-2691 bp Gene: COG1203:cas3 Type: Type-I Location: 2688-5918 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5976-7280 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7267-8250 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8261-9289 bp Gene: cd09739:cas6f Type: other Location: 9293-9856 bp CRISPR array Location: 10106-10613 bp Num of repeats: 9 Spacers: s12-s19 CRISPR array Location: 10106-10613 bp Num of repeats: 9 Spacers: s12-s19 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 765-1453 bp]: array | spacers
           [Locus range 10106-10613 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)