CRISPRone

CRISPRone report for GCA_900143965.1_61

♦ Seq 1: FRFS01000004.1 Pseudomonas aeruginosa isolate 61 genome assembly, contig: 61.NODE_4_length_390957_cov_57.652508, whole genome shotgun sequence

⇒Summary: seq-len = 391017 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207816-208444 bp Zoom in on locus 1 x11 CRISPR array Location: 207816-208444 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 207816-208444 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 207816-208444 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRFS01000022.1 Pseudomonas aeruginosa isolate 61 genome assembly, contig: 61.NODE_25_length_65572_cov_58.056152, whole genome shotgun sequence

⇒Summary: seq-len = 65632 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 53360-65347 bp Zoom in on locus 1 x27 x25 CRISPR array Location: 53360-54945 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 53360-54945 bp Num of repeats: 27 Spacers: s1-s26 Gene: cd09739:cas6f Type: other Location: 55129-55692 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 55696-56724 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 56735-57718 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 57705-59006 bp Gene: COG1203:cas3 Type: Type-I Location: 59417-62647 bp Gene: cd09718:cas1 Type: universal Location: 62644-63618 bp CRISPR array Location: 63879-65347 bp Num of repeats: 25 Spacers: s27-s50 CRISPR array Location: 63879-65347 bp Num of repeats: 25 Spacers: s27-s50 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 53360-54945 bp]: array | spacers
           [Locus range 63879-65347 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)