CRISPRone

CRISPRone report for GCA_900144165.1_67

♦ Seq 1: FRGR01000028.1 Pseudomonas aeruginosa isolate 67 genome assembly, contig: 67.NODE_29_length_121130_cov_57.225773, whole genome shotgun sequence

⇒Summary: seq-len = 121178 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 275-904 bp Zoom in on locus 1 x11 CRISPR array Location: 275-904 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 275-904 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 275-904 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRGR01000110.1 Pseudomonas aeruginosa isolate 67 genome assembly, contig: 67.NODE_248_length_50776_cov_56.935856, whole genome shotgun sequence

⇒Summary: seq-len = 50824 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38157-50084 bp Zoom in on locus 1 x27 x24 CRISPR array Location: 38157-39742 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 38157-39742 bp Num of repeats: 27 Spacers: s1-s26 Gene: cd09739:cas6f Type: other Location: 39926-40489 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40493-41521 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41532-42515 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42502-43803 bp Gene: COG1203:cas3 Type: Type-I Location: 44214-47444 bp Gene: cd09718:cas1 Type: universal Location: 47441-48415 bp CRISPR array Location: 48676-50084 bp Num of repeats: 24 Spacers: s27-s49 CRISPR array Location: 48676-50084 bp Num of repeats: 24 Spacers: s27-s49 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38157-39742 bp]: array | spacers
           [Locus range 48676-50084 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)