CRISPRone

CRISPRone report for GCA_900144245.1_81

♦ Seq 1: FRHJ01000131.1 Pseudomonas aeruginosa isolate 81 genome assembly, contig: 81.NODE_150_length_18491_cov_58.131577, whole genome shotgun sequence

⇒Summary: seq-len = 18553 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 289-2177 bp Zoom in on locus 1 x32 CRISPR array Location: 289-2177 bp Num of repeats: 32 Spacers: s1-s31 CRISPR array Location: 289-2177 bp Num of repeats: 32 Spacers: s1-s31 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 289-2177 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRHJ01000095.1 Pseudomonas aeruginosa isolate 81 genome assembly, contig: 81.NODE_105_length_102998_cov_57.800705, whole genome shotgun sequence

⇒Summary: seq-len = 103060 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 68609-78457 bp Zoom in on locus 1 x12 x9 CRISPR array Location: 68609-69297 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 68609-69297 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09718:cas1 Type: universal Location: 69561-70535 bp Gene: COG1203:cas3 Type: Type-I Location: 70532-73762 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 73820-75124 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 75111-76094 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 76105-77133 bp Gene: cd09739:cas6f Type: other Location: 77137-77700 bp CRISPR array Location: 77950-78457 bp Num of repeats: 9 Spacers: s12-s19 CRISPR array Location: 77950-78457 bp Num of repeats: 9 Spacers: s12-s19 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 68609-69297 bp]: array | spacers
           [Locus range 77950-78457 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)