CRISPRone

CRISPRone report for GCA_900144325.1_89

♦ Seq 1: FRHI01000011.1 Pseudomonas aeruginosa isolate 89 genome assembly, contig: 89.NODE_15_length_330510_cov_45.767704, whole genome shotgun sequence

⇒Summary: seq-len = 330574 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 291-2179 bp Zoom in on locus 1 x32 CRISPR array Location: 291-2179 bp Num of repeats: 32 Spacers: s1-s31 CRISPR array Location: 291-2179 bp Num of repeats: 32 Spacers: s1-s31 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 291-2179 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRHI01000103.1 Pseudomonas aeruginosa isolate 89 genome assembly, contig: 89.NODE_213_length_201300_cov_45.423218, whole genome shotgun sequence

⇒Summary: seq-len = 201364 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37202-47050 bp Zoom in on locus 1 x9 x12 CRISPR array Location: 37202-37710 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 37202-37710 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09739:cas6f Type: other Location: 37959-38522 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38526-39554 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39565-40548 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40535-41839 bp Gene: COG1203:cas3 Type: Type-I Location: 41897-45127 bp Gene: cd09718:cas1 Type: universal Location: 45124-46098 bp CRISPR array Location: 46363-47050 bp Num of repeats: 12 Spacers: s9-s19 CRISPR array Location: 46363-47050 bp Num of repeats: 12 Spacers: s9-s19 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37202-37710 bp]: array | spacers
           [Locus range 46363-47050 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)