CRISPRone

CRISPRone report for GCA_900144345.1_92

♦ Seq 1: FRHP01000058.1 Pseudomonas aeruginosa isolate 92 genome assembly, contig: 92.NODE_65_length_380232_cov_68.618568, whole genome shotgun sequence

⇒Summary: seq-len = 380282 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16866-17434 bp Zoom in on locus 1 x10 CRISPR array Location: 16866-17434 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 16866-17434 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 16866-17434 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRHP01000144.1 Pseudomonas aeruginosa isolate 92 genome assembly, contig: 92.NODE_238_length_48880_cov_61.212234, whole genome shotgun sequence

⇒Summary: seq-len = 48930 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1097-10758 bp Zoom in on locus 1 x11 x8 CRISPR array Location: 1097-1725 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 1097-1725 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09718:cas1 Type: universal Location: 1989-2963 bp Gene: COG1203:cas3 Type: Type-I Location: 2960-6190 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6248-7552 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7539-8522 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8533-9561 bp Gene: cd09739:cas6f Type: other Location: 9565-10128 bp CRISPR array Location: 10312-10758 bp Num of repeats: 8 Spacers: s11-s17 CRISPR array Location: 10312-10758 bp Num of repeats: 8 Spacers: s11-s17 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1097-1725 bp]: array | spacers
           [Locus range 10312-10758 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRHP01000135.1 Pseudomonas aeruginosa isolate 92 genome assembly, contig: 92.NODE_188_length_100557_cov_87.450783, whole genome shotgun sequence

⇒Summary: seq-len = 100607 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 61815-71100 bp Zoom in on locus 1 x23 Gene: cd09641:cas3HD Type: Type-I Location: 61815-64049 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 64099-64773 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 64770-66563 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 66560-67429 bp Gene: pfam01930:cas4 Type: Type-I Location: 67448-68080 bp Gene: cd09721:cas1 Type: universal Location: 68084-69124 bp Gene: cd09725:cas2 Type: universal Location: 69134-69424 bp CRISPR array Location: 69604-71100 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 69604-71100 bp Num of repeats: 23 Spacers: s1-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 69604-71100 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)