CRISPRone

CRISPRone report for GCA_900144375.1_94

♦ Seq 1: FRHR01000055.1 Pseudomonas aeruginosa isolate 94 genome assembly, contig: 94.NODE_81_length_38697_cov_75.660904, whole genome shotgun sequence

⇒Summary: seq-len = 38741 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 65-632 bp Zoom in on locus 1 x10 CRISPR array Location: 65-632 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 65-632 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 65-632 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRHR01000002.1 Pseudomonas aeruginosa isolate 94 genome assembly, contig: 94.NODE_2_length_713370_cov_80.532066, whole genome shotgun sequence

⇒Summary: seq-len = 713414 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 285460-286928 bp Zoom in on locus 1 x25 CRISPR array Location: 285460-286928 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 285460-286928 bp Num of repeats: 25 Spacers: s1-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 285460-286928 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRHR01000075.1 Pseudomonas aeruginosa isolate 94 genome assembly, contig: 94.NODE_152_length_10748_cov_82.837456, whole genome shotgun sequence

⇒Summary: seq-len = 10792 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 59-10488 bp Zoom in on locus 1 x3 x23 CRISPR array Location: 59-207 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 59-207 bp Num of repeats: 3 Spacers: s1-s2 Gene: cd09739:cas6f Type: other Location: 390-953 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 957-1985 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1996-2979 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2966-4267 bp Gene: COG1203:cas3 Type: Type-I Location: 4678-7908 bp Gene: cd09718:cas1 Type: universal Location: 7905-8879 bp CRISPR array Location: 9140-10488 bp Num of repeats: 23 Spacers: s3-s24 CRISPR array Location: 9140-10488 bp Num of repeats: 23 Spacers: s3-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 59-207 bp]: array | spacers
           [Locus range 9140-10488 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)