CRISPRone

CRISPRone report for GCA_900144795.1_137

♦ Seq 1: FRKC01000766.1 Pseudomonas aeruginosa isolate 137 genome assembly, contig: 137.NODE_988_length_2957_cov_96.449104, whole genome shotgun sequence

⇒Summary: seq-len = 3007 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 967-1912 bp Zoom in on locus 1 x16 CRISPR array Location: 967-1912 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 967-1912 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 967-1912 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRKC01001731.1 Pseudomonas aeruginosa isolate 137 genome assembly, contig: 137.NODE_2554_length_1892_cov_97.747887, whole genome shotgun sequence

⇒Summary: seq-len = 1942 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 22-173 bp Zoom in on locus 1 x3 CRISPR array Location: 22-173 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 22-173 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 22-173 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRKC01000033.1 Pseudomonas aeruginosa isolate 137 genome assembly, contig: 137.NODE_38_length_8610_cov_117.150055, whole genome shotgun sequence

⇒Summary: seq-len = 8660 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-8657 bp Zoom in on locus 1 x11 x10 CRISPR array Location: 0-625 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 0-625 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 721-1298 bp Num of repeats: 10 Spacers: s11-s19 CRISPR array Location: 721-1298 bp Num of repeats: 10 Spacers: s11-s19 Gene: pfam09707:cas2 Type: universal Location: 1363-1662 bp Gene: cd09719:cas1 Type: universal Location: 1659-2549 bp Gene: pfam08798:cas6e Type: other Location: 2576-3115 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 3162-3824 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 3827-4969 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 4979-5509 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 5506-7074 bp Gene: COG1203:cas3 Type: Type-I Location: 7077-8657 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 0-625 bp]: array | spacers
           [Locus range 721-1298 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FRKC01000864.1 Pseudomonas aeruginosa isolate 137 genome assembly, contig: 137.NODE_1122_length_4308_cov_104.130684, whole genome shotgun sequence

⇒Summary: seq-len = 4358 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 451-598 bp Zoom in on locus 1 x3 CRISPR array Location: 451-598 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 451-598 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 451-598 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)