CRISPRone

CRISPRone report for GCA_900144875.1_144

♦ Seq 1: FRKL01001830.1 Pseudomonas aeruginosa isolate 144 genome assembly, contig: 144.NODE_2830_length_4920_cov_68.051018, whole genome shotgun sequence

⇒Summary: seq-len = 4964 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1171-2218 bp Zoom in on locus 1 x18 CRISPR array Location: 1171-2218 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 1171-2218 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1171-2218 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRKL01000314.1 Pseudomonas aeruginosa isolate 144 genome assembly, contig: 144.NODE_394_length_18667_cov_138.081528, whole genome shotgun sequence

⇒Summary: seq-len = 18711 bp; # of CRISPR array = 0; # of cas gene = 3  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2408-10208 bp Zoom in on locus 1 Gene: pfam00078:RT Type: other Location: 2408-4378 bp Gene: unk Type: unknown Location: 5729-6505 bp Gene: cls001593:casR Type: Type-I Location: 6676-7797 bp Gene: unk Type: unknown Location: 8059-8220 bp Gene: pfam00078:RT Type: other Location: 8523-10208 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRKL01000011.1 Pseudomonas aeruginosa isolate 144 genome assembly, contig: 144.NODE_13_length_66221_cov_153.920700, whole genome shotgun sequence

⇒Summary: seq-len = 66265 bp; # of CRISPR array = 0; # of cas gene = 4  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 29957-47236 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 29957-32053 bp Gene: pfam13280:WYL Type: other Location: 32127-33143 bp Gene: pfam13280:WYL Type: other Location: 42314-43189 bp Gene: unk Type: unknown Location: 43385-43600 bp Gene: cd09637:cas4 Type: other Location: 43826-47236 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)