CRISPRone

CRISPRone report for GCA_900144915.1_149

♦ Seq 1: FRJG01000099.1 Pseudomonas aeruginosa isolate 149 genome assembly, contig: 149.NODE_161_length_79383_cov_44.114155, whole genome shotgun sequence

⇒Summary: seq-len = 79429 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 32679-43123 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 32679-33367 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 32679-33367 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 33616-34179 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 34183-35211 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 35222-36205 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 36192-37496 bp Gene: COG1203:cas3 Type: Type-I Location: 37554-40784 bp Gene: cd09718:cas1 Type: universal Location: 40781-41755 bp CRISPR array Location: 42016-43123 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 42016-43123 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 32679-33367 bp]: array | spacers
           [Locus range 42016-43123 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)