CRISPRone

CRISPRone report for GCA_900144925.1_150

♦ Seq 1: FRJI01000043.1 Pseudomonas aeruginosa isolate 150 genome assembly, contig: 150.NODE_43_length_119730_cov_45.678127, whole genome shotgun sequence

⇒Summary: seq-len = 119780 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 85452-95896 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 85452-86560 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 85452-86560 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 86820-87794 bp Gene: COG1203:cas3 Type: Type-I Location: 87791-91021 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 91079-92383 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 92370-93353 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 93364-94392 bp Gene: cd09739:cas6f Type: other Location: 94396-94959 bp CRISPR array Location: 95209-95896 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 95209-95896 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 85452-86560 bp]: array | spacers
           [Locus range 95209-95896 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)