CRISPRone

CRISPRone report for GCA_900144935.1_151

♦ Seq 1: FRJJ01000185.1 Pseudomonas aeruginosa isolate 151 genome assembly, contig: 151.NODE_208_length_67202_cov_41.793934, whole genome shotgun sequence

⇒Summary: seq-len = 67256 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 32923-43367 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 32923-34031 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 32923-34031 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 34291-35265 bp Gene: COG1203:cas3 Type: Type-I Location: 35262-38492 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 38550-39854 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39841-40824 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40835-41863 bp Gene: cd09739:cas6f Type: other Location: 41867-42430 bp CRISPR array Location: 42680-43367 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 42680-43367 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 32923-34031 bp]: array | spacers
           [Locus range 42680-43367 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)