CRISPRone

CRISPRone report for GCA_900144965.1_153

♦ Seq 1: FRJS01000004.1 Pseudomonas aeruginosa isolate 153 genome assembly, contig: 153.NODE_4_length_67320_cov_51.197044, whole genome shotgun sequence

⇒Summary: seq-len = 67370 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33033-43477 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 33033-34141 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 33033-34141 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 34401-35375 bp Gene: COG1203:cas3 Type: Type-I Location: 35372-38602 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 38660-39964 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39951-40934 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40945-41973 bp Gene: cd09739:cas6f Type: other Location: 41977-42540 bp CRISPR array Location: 42790-43477 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 42790-43477 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33033-34141 bp]: array | spacers
           [Locus range 42790-43477 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)