CRISPRone

CRISPRone report for GCA_900144975.1_154

♦ Seq 1: FRJP01000226.1 Pseudomonas aeruginosa isolate 154 genome assembly, contig: 154.NODE_267_length_67315_cov_44.804146, whole genome shotgun sequence

⇒Summary: seq-len = 67369 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33037-43481 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 33037-34145 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 33037-34145 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 34405-35379 bp Gene: COG1203:cas3 Type: Type-I Location: 35376-38606 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 38664-39968 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39955-40938 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40949-41977 bp Gene: cd09739:cas6f Type: other Location: 41981-42544 bp CRISPR array Location: 42794-43481 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 42794-43481 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33037-34145 bp]: array | spacers
           [Locus range 42794-43481 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)