CRISPRone

CRISPRone report for GCA_900144985.1_156

♦ Seq 1: FRJM01000053.1 Pseudomonas aeruginosa isolate 156 genome assembly, contig: 156.NODE_68_length_70605_cov_54.804165, whole genome shotgun sequence

⇒Summary: seq-len = 70649 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36305-46749 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 36305-37413 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 36305-37413 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 37673-38647 bp Gene: COG1203:cas3 Type: Type-I Location: 38644-41874 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41932-43236 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 43223-44206 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 44217-45245 bp Gene: cd09739:cas6f Type: other Location: 45249-45812 bp CRISPR array Location: 46062-46749 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 46062-46749 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36305-37413 bp]: array | spacers
           [Locus range 46062-46749 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)