CRISPRone

CRISPRone report for GCA_900145005.1_158

♦ Seq 1: FRJN01000027.1 Pseudomonas aeruginosa isolate 158 genome assembly, contig: 158.NODE_28_length_38694_cov_43.064789, whole genome shotgun sequence

⇒Summary: seq-len = 38746 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36735-38745 bp Zoom in on locus 1 x12 CRISPR array Location: 36735-37423 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 36735-37423 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 37672-38235 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38239-38745 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36735-37423 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRJN01000001.1 Pseudomonas aeruginosa isolate 158 genome assembly, contig: 158.NODE_1_length_122014_cov_43.842968, whole genome shotgun sequence

⇒Summary: seq-len = 122066 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 113591-122063 bp Zoom in on locus 1 x19 CRISPR array Location: 113591-114699 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 113591-114699 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 114959-115933 bp Gene: COG1203:cas3 Type: Type-I Location: 115930-119160 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 119218-120522 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 120509-121492 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 121503-122063 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 113591-114699 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)