CRISPRone

CRISPRone report for GCA_900145015.1_159

♦ Seq 1: FRJT01000105.1 Pseudomonas aeruginosa isolate 159 genome assembly, contig: 159.NODE_124_length_67318_cov_52.976231, whole genome shotgun sequence

⇒Summary: seq-len = 67366 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 23892-34336 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 23892-24580 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 23892-24580 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 24829-25392 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 25396-26424 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 26435-27418 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27405-28709 bp Gene: COG1203:cas3 Type: Type-I Location: 28767-31997 bp Gene: cd09718:cas1 Type: universal Location: 31994-32968 bp CRISPR array Location: 33229-34336 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 33229-34336 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 23892-24580 bp]: array | spacers
           [Locus range 33229-34336 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)