CRISPRone

CRISPRone report for GCA_900145025.1_160

♦ Seq 1: FRJQ01000101.1 Pseudomonas aeruginosa isolate 160 genome assembly, contig: 160.NODE_109_length_25868_cov_47.292023, whole genome shotgun sequence

⇒Summary: seq-len = 25918 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-2027 bp Zoom in on locus 1 x12 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2-523 bp Gene: cd09739:cas6f Type: other Location: 527-1090 bp CRISPR array Location: 1340-2027 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 1340-2027 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1340-2027 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRJQ01000151.1 Pseudomonas aeruginosa isolate 160 genome assembly, contig: 160.NODE_186_length_41448_cov_45.484486, whole genome shotgun sequence

⇒Summary: seq-len = 41498 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-8466 bp Zoom in on locus 1 x19 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3-554 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 565-1548 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1535-2839 bp Gene: COG1203:cas3 Type: Type-I Location: 2897-6127 bp Gene: cd09718:cas1 Type: universal Location: 6124-7098 bp CRISPR array Location: 7359-8466 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 7359-8466 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 7359-8466 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)