CRISPRone

CRISPRone report for GCA_900145045.1_162

♦ Seq 1: FRJY01000072.1 Pseudomonas aeruginosa isolate 162 genome assembly, contig: 162.NODE_95_length_76095_cov_44.318050, whole genome shotgun sequence

⇒Summary: seq-len = 76143 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 32669-43113 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 32669-33357 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 32669-33357 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 33606-34169 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 34173-35201 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 35212-36195 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 36182-37486 bp Gene: COG1203:cas3 Type: Type-I Location: 37544-40774 bp Gene: cd09718:cas1 Type: universal Location: 40771-41745 bp CRISPR array Location: 42006-43113 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 42006-43113 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 32669-33357 bp]: array | spacers
           [Locus range 42006-43113 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)