CRISPRone

CRISPRone report for GCA_900145055.1_163

♦ Seq 1: FRJZ01000042.1 Pseudomonas aeruginosa isolate 163 genome assembly, contig: 163.NODE_46_length_161898_cov_48.522594, whole genome shotgun sequence

⇒Summary: seq-len = 161948 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 118825-129269 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 118825-119933 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 118825-119933 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 120193-121167 bp Gene: COG1203:cas3 Type: Type-I Location: 121164-124394 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 124452-125756 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 125743-126726 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 126737-127765 bp Gene: cd09739:cas6f Type: other Location: 127769-128332 bp CRISPR array Location: 128582-129269 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 128582-129269 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 118825-119933 bp]: array | spacers
           [Locus range 128582-129269 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)