CRISPRone

CRISPRone report for GCA_900145065.1_164

♦ Seq 1: FRKA01000041.1 Pseudomonas aeruginosa isolate 164 genome assembly, contig: 164.NODE_44_length_119865_cov_51.867584, whole genome shotgun sequence

⇒Summary: seq-len = 119909 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 23889-34333 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 23889-24577 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 23889-24577 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 24826-25389 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 25393-26421 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 26432-27415 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27402-28706 bp Gene: COG1203:cas3 Type: Type-I Location: 28764-31994 bp Gene: cd09718:cas1 Type: universal Location: 31991-32965 bp CRISPR array Location: 33226-34333 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 33226-34333 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 23889-24577 bp]: array | spacers
           [Locus range 33226-34333 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)