CRISPRone

CRISPRone report for GCA_900145105.1_168

♦ Seq 1: FRKG01000086.1 Pseudomonas aeruginosa isolate 168 genome assembly, contig: 168.NODE_162_length_79384_cov_50.561096, whole genome shotgun sequence

⇒Summary: seq-len = 79428 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36305-46752 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 36305-37413 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 36305-37413 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 37673-38647 bp Gene: COG1203:cas3 Type: Type-I Location: 38644-41877 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41935-43239 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 43226-44209 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 44220-45248 bp Gene: cd09739:cas6f Type: other Location: 45252-45815 bp CRISPR array Location: 46065-46752 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 46065-46752 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36305-37413 bp]: array | spacers
           [Locus range 46065-46752 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)