CRISPRone

CRISPRone report for GCA_900145125.1_171

♦ Seq 1: FRKN01000058.1 Pseudomonas aeruginosa isolate 171 genome assembly, contig: 171.NODE_64_length_35193_cov_56.157616, whole genome shotgun sequence

⇒Summary: seq-len = 35241 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 909-11353 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 909-2017 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 909-2017 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 2277-3251 bp Gene: COG1203:cas3 Type: Type-I Location: 3248-6478 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6536-7840 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7827-8810 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8821-9849 bp Gene: cd09739:cas6f Type: other Location: 9853-10416 bp CRISPR array Location: 10666-11353 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 10666-11353 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 909-2017 bp]: array | spacers
           [Locus range 10666-11353 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)