CRISPRone

CRISPRone report for GCA_900145145.1_172

♦ Seq 1: FRKP01000046.1 Pseudomonas aeruginosa isolate 172 genome assembly, contig: 172.NODE_46_length_156366_cov_44.970058, whole genome shotgun sequence

⇒Summary: seq-len = 156420 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 113592-123736 bp Zoom in on locus 1 x19 x7 CRISPR array Location: 113592-114700 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 113592-114700 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 114960-115934 bp Gene: COG1203:cas3 Type: Type-I Location: 115931-119161 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 119219-120523 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 120510-121493 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 121504-122532 bp Gene: cd09739:cas6f Type: other Location: 122536-123099 bp CRISPR array Location: 123349-123736 bp Num of repeats: 7 Spacers: s19-s24 CRISPR array Location: 123349-123736 bp Num of repeats: 7 Spacers: s19-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 113592-114700 bp]: array | spacers
           [Locus range 123349-123736 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)