CRISPRone

CRISPRone report for GCA_900145435.1_201

♦ Seq 1: FRLS01000008.1 Pseudomonas aeruginosa isolate 201 genome assembly, contig: 201.NODE_11_length_67566_cov_46.907543, whole genome shotgun sequence

⇒Summary: seq-len = 67616 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36353-47514 bp Zoom in on locus 1 x11 x33 CRISPR array Location: 36353-36981 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 36353-36981 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09739:cas6f Type: other Location: 37165-37728 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37732-38760 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 38771-39754 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39741-41045 bp Gene: COG1203:cas3 Type: Type-I Location: 41103-44333 bp Gene: cd09718:cas1 Type: universal Location: 44330-45304 bp CRISPR array Location: 45566-47514 bp Num of repeats: 33 Spacers: s11-s42 CRISPR array Location: 45566-47514 bp Num of repeats: 33 Spacers: s11-s42 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36353-36981 bp]: array | spacers
           [Locus range 45566-47514 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRLS01000087.1 Pseudomonas aeruginosa isolate 201 genome assembly, contig: 201.NODE_133_length_310991_cov_53.536823, whole genome shotgun sequence

⇒Summary: seq-len = 311041 bp; # of CRISPR array = 0; # of cas gene = 5  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 111662-132296 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 111662-114028 bp Gene: unk Type: unknown Location: 114421-115068 bp Gene: unk Type: unknown Location: 115134-115421 bp Gene: pfam13280:WYL Type: other Location: 115552-116427 bp Gene: unk Type: unknown Location: 116442-116975 bp Gene: unk Type: unknown Location: 117032-117463 bp Gene: unk Type: unknown Location: 117781-118659 bp Gene: pfam13280:WYL Type: other Location: 119266-120285 bp Gene: cd09637:cas4 Type: other Location: 127087-129738 bp Gene: unk Type: unknown Location: 129746-130312 bp Gene: unk Type: unknown Location: 130348-131220 bp Gene: pfam13280:WYL Type: other Location: 131553-132296 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRLS01000030.1 Pseudomonas aeruginosa isolate 201 genome assembly, contig: 201.NODE_34_length_114495_cov_52.227161, whole genome shotgun sequence

⇒Summary: seq-len = 114545 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 71620-82205 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 71620-72489 bp Gene: pfam00078:RT Type: other Location: 77398-78666 bp Gene: unk Type: unknown Location: 78816-79214 bp Gene: unk Type: unknown Location: 79398-79577 bp Gene: cls000170:cas4 Type: Type-I Location: 80661-82205 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)