CRISPRone

CRISPRone report for GCA_900145445.1_203

♦ Seq 1: FRLT01000118.1 Pseudomonas aeruginosa isolate 203 genome assembly, contig: 203.NODE_181_length_58768_cov_39.693100, whole genome shotgun sequence

⇒Summary: seq-len = 58814 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 23898-35059 bp Zoom in on locus 1 x11 x33 CRISPR array Location: 23898-24526 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 23898-24526 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09739:cas6f Type: other Location: 24710-25273 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 25277-26305 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 26316-27299 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27286-28590 bp Gene: COG1203:cas3 Type: Type-I Location: 28648-31878 bp Gene: cd09718:cas1 Type: universal Location: 31875-32849 bp CRISPR array Location: 33111-35059 bp Num of repeats: 33 Spacers: s11-s42 CRISPR array Location: 33111-35059 bp Num of repeats: 33 Spacers: s11-s42 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 23898-24526 bp]: array | spacers
           [Locus range 33111-35059 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRLT01000077.1 Pseudomonas aeruginosa isolate 203 genome assembly, contig: 203.NODE_99_length_88029_cov_44.543934, whole genome shotgun sequence

⇒Summary: seq-len = 88075 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 69274-79859 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 69274-70143 bp Gene: pfam00078:RT Type: other Location: 75052-76320 bp Gene: unk Type: unknown Location: 76470-76868 bp Gene: unk Type: unknown Location: 77052-77231 bp Gene: cls000170:cas4 Type: Type-I Location: 78315-79859 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)