CRISPRone

CRISPRone report for GCA_900145465.1_204

♦ Seq 1: FRLW01000050.1 Pseudomonas aeruginosa isolate 204 genome assembly, contig: 204.NODE_75_length_311616_cov_56.246418, whole genome shotgun sequence

⇒Summary: seq-len = 311658 bp; # of CRISPR array = 0; # of cas gene = 5  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 111664-132298 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 111664-114030 bp Gene: unk Type: unknown Location: 114423-115070 bp Gene: unk Type: unknown Location: 115136-115423 bp Gene: pfam13280:WYL Type: other Location: 115554-116429 bp Gene: unk Type: unknown Location: 116444-116977 bp Gene: unk Type: unknown Location: 117034-117465 bp Gene: unk Type: unknown Location: 117783-118661 bp Gene: pfam13280:WYL Type: other Location: 119268-120287 bp Gene: cd09637:cas4 Type: other Location: 127089-129740 bp Gene: unk Type: unknown Location: 129748-130314 bp Gene: unk Type: unknown Location: 130350-131222 bp Gene: pfam13280:WYL Type: other Location: 131555-132298 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRLW01000029.1 Pseudomonas aeruginosa isolate 204 genome assembly, contig: 204.NODE_35_length_228148_cov_54.251923, whole genome shotgun sequence

⇒Summary: seq-len = 228190 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 148333-158918 bp Zoom in on locus 1 Gene: cls000170:cas4 Type: Type-I Location: 148333-149877 bp Gene: unk Type: unknown Location: 150961-151140 bp Gene: pfam00078:RT Type: other Location: 151872-153140 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 158049-158918 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRLW01000034.1 Pseudomonas aeruginosa isolate 204 genome assembly, contig: 204.NODE_45_length_63893_cov_51.178188, whole genome shotgun sequence

⇒Summary: seq-len = 63935 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 20095-31256 bp Zoom in on locus 1 x33 x11 CRISPR array Location: 20095-22044 bp Num of repeats: 33 Spacers: s1-s32 CRISPR array Location: 20095-22044 bp Num of repeats: 33 Spacers: s1-s32 Gene: cd09718:cas1 Type: universal Location: 22305-23279 bp Gene: COG1203:cas3 Type: Type-I Location: 23276-26506 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 26564-27868 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 27855-28838 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 28849-29877 bp Gene: cd09739:cas6f Type: other Location: 29881-30444 bp CRISPR array Location: 30629-31256 bp Num of repeats: 11 Spacers: s33-s42 CRISPR array Location: 30629-31256 bp Num of repeats: 11 Spacers: s33-s42 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 20095-22044 bp]: array | spacers
           [Locus range 30629-31256 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)