CRISPRone

CRISPRone report for GCA_900145485.1_206

♦ Seq 1: FRLX01000035.1 Pseudomonas aeruginosa isolate 206 genome assembly, contig: 206.NODE_38_length_69797_cov_51.211727, whole genome shotgun sequence

⇒Summary: seq-len = 69855 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38171-48432 bp Zoom in on locus 1 x15 x14 CRISPR array Location: 38171-39040 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 38171-39040 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09739:cas6f Type: other Location: 39223-39786 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39790-40818 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40829-41812 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41799-43103 bp Gene: COG1203:cas3 Type: Type-I Location: 43161-46391 bp Gene: cd09718:cas1 Type: universal Location: 46388-47362 bp CRISPR array Location: 47624-48432 bp Num of repeats: 14 Spacers: s15-s27 CRISPR array Location: 47624-48432 bp Num of repeats: 14 Spacers: s15-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38171-39040 bp]: array | spacers
           [Locus range 47624-48432 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRLX01000016.1 Pseudomonas aeruginosa isolate 206 genome assembly, contig: 206.NODE_16_length_163369_cov_55.038555, whole genome shotgun sequence

⇒Summary: seq-len = 163427 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 914-1962 bp Zoom in on locus 1 x18 CRISPR array Location: 914-1962 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 914-1962 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 914-1962 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)