CRISPRone

CRISPRone report for GCA_900145495.1_207

♦ Seq 1: FRLZ01000015.1 Pseudomonas aeruginosa isolate 207 genome assembly, contig: 207.NODE_15_length_62780_cov_55.287048, whole genome shotgun sequence

⇒Summary: seq-len = 62836 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62-990 bp Zoom in on locus 1 x16 CRISPR array Location: 62-990 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 62-990 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 62-990 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRLZ01000035.1 Pseudomonas aeruginosa isolate 207 genome assembly, contig: 207.NODE_38_length_48435_cov_52.549541, whole genome shotgun sequence

⇒Summary: seq-len = 48491 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62-10323 bp Zoom in on locus 1 x14 x15 CRISPR array Location: 62-871 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 62-871 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09718:cas1 Type: universal Location: 1132-2106 bp Gene: COG1203:cas3 Type: Type-I Location: 2103-5333 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5391-6695 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6682-7665 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7676-8704 bp Gene: cd09739:cas6f Type: other Location: 8708-9271 bp CRISPR array Location: 9455-10323 bp Num of repeats: 15 Spacers: s14-s27 CRISPR array Location: 9455-10323 bp Num of repeats: 15 Spacers: s14-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 62-871 bp]: array | spacers
           [Locus range 9455-10323 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)