CRISPRone

CRISPRone report for GCA_900145525.1_210

♦ Seq 1: FRMC01000038.1 Pseudomonas aeruginosa isolate 210 genome assembly, contig: 210.NODE_43_length_142481_cov_61.333271, whole genome shotgun sequence

⇒Summary: seq-len = 142533 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 58-10319 bp Zoom in on locus 1 x14 x15 CRISPR array Location: 58-867 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 58-867 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09718:cas1 Type: universal Location: 1128-2102 bp Gene: COG1203:cas3 Type: Type-I Location: 2099-5329 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5387-6691 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6678-7661 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7672-8700 bp Gene: cd09739:cas6f Type: other Location: 8704-9267 bp CRISPR array Location: 9451-10319 bp Num of repeats: 15 Spacers: s14-s27 CRISPR array Location: 9451-10319 bp Num of repeats: 15 Spacers: s14-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 58-867 bp]: array | spacers
           [Locus range 9451-10319 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRMC01000036.1 Pseudomonas aeruginosa isolate 210 genome assembly, contig: 210.NODE_41_length_366964_cov_61.425468, whole genome shotgun sequence

⇒Summary: seq-len = 367016 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 58-1106 bp Zoom in on locus 1 x18 CRISPR array Location: 58-1106 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 58-1106 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 58-1106 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)