CRISPRone

CRISPRone report for GCA_900145575.1_215

♦ Seq 1: FRMI01000045.1 Pseudomonas aeruginosa isolate 215 genome assembly, contig: 215.NODE_68_length_407914_cov_63.177395, whole genome shotgun sequence

⇒Summary: seq-len = 407964 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 56-1104 bp Zoom in on locus 1 x18 CRISPR array Location: 56-1104 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 56-1104 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 56-1104 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRMI01000011.1 Pseudomonas aeruginosa isolate 215 genome assembly, contig: 215.NODE_11_length_142478_cov_61.056030, whole genome shotgun sequence

⇒Summary: seq-len = 142528 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 56-10317 bp Zoom in on locus 1 x14 x15 CRISPR array Location: 56-865 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 56-865 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09718:cas1 Type: universal Location: 1126-2100 bp Gene: COG1203:cas3 Type: Type-I Location: 2097-5327 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5385-6689 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6676-7659 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7670-8698 bp Gene: cd09739:cas6f Type: other Location: 8702-9265 bp CRISPR array Location: 9449-10317 bp Num of repeats: 15 Spacers: s14-s27 CRISPR array Location: 9449-10317 bp Num of repeats: 15 Spacers: s14-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 56-865 bp]: array | spacers
           [Locus range 9449-10317 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)