CRISPRone

CRISPRone report for GCA_900146115.1_281

♦ Seq 1: FROI01000009.1 Pseudomonas aeruginosa isolate 281 genome assembly, contig: 281.NODE_11_length_273666_cov_44.923637, whole genome shotgun sequence

⇒Summary: seq-len = 273718 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 246387-256899 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 246387-246905 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 246387-246905 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 247678-250359 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 250362-251930 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 251927-252457 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 252467-253609 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 253611-254273 bp Gene: pfam08798:cas6e Type: other Location: 254248-254859 bp Gene: cd09719:cas1 Type: universal Location: 254886-255776 bp Gene: pfam09707:cas2 Type: universal Location: 255773-256072 bp CRISPR array Location: 256137-256899 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 256137-256899 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 246387-246905 bp]: array | spacers
           [Locus range 256137-256899 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)