CRISPRone

CRISPRone report for GCA_900146125.1_282

♦ Seq 1: FROK01000038.1 Pseudomonas aeruginosa isolate 282 genome assembly, contig: 282.NODE_38_length_35700_cov_44.324928, whole genome shotgun sequence

⇒Summary: seq-len = 35750 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8447-18959 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 8447-8965 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 8447-8965 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 9738-12419 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12422-13990 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 13987-14517 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14527-15669 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15671-16333 bp Gene: pfam08798:cas6e Type: other Location: 16308-16919 bp Gene: cd09719:cas1 Type: universal Location: 16946-17836 bp Gene: pfam09707:cas2 Type: universal Location: 17833-18132 bp CRISPR array Location: 18197-18959 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 18197-18959 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8447-8965 bp]: array | spacers
           [Locus range 18197-18959 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)