CRISPRone

CRISPRone report for GCA_900146135.1_283

♦ Seq 1: FROL01000054.1 Pseudomonas aeruginosa isolate 283 genome assembly, contig: 283.NODE_66_length_35706_cov_54.368984, whole genome shotgun sequence

⇒Summary: seq-len = 35752 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16796-27307 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 16796-17557 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 16796-17557 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 17622-17921 bp Gene: cd09719:cas1 Type: universal Location: 17918-18808 bp Gene: pfam08798:cas6e Type: other Location: 18835-19374 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 19421-20083 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 20085-21227 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 21237-21767 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 21764-23332 bp Gene: cd09641:cas3HD Type: Type-I Location: 23335-26016 bp CRISPR array Location: 26790-27307 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 26790-27307 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 16796-17557 bp]: array | spacers
           [Locus range 26790-27307 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)